Line |
Haplotype |
Population |
Frequency (%) |
Sample Size |
Location |
1 | A*26:01:01-B*15:18:01-C*07:04:01-DRB1*04:03:01-DQB1*03:02:01 | India Kerala Malayalam speaking | 0.56 | 356 | 13_1_N_80_15_E |
2 | A*68:01-B*15:18-C*07:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPB1*02:01 | Sri Lanka Colombo | 0.42 | 714 | 6_56_N_79_50_E |
3 | A*24-B*15:18-DRB1*04-DQB1*03:02 | Mexico Chiapas Rural | 0.41 | 121 | 16_47_N_92_41_W |
4 | A*33:03:01-B*15:18:01-C*07:04:01-DRB1*04:03:01-DQB1*03:02:01 | India Karnataka Kannada Speaking | 0.29 | 174 | 12_57_N_77_36_E |
5 | A*68:01:02-B*15:18:01-C*16:02:01-DRB1*04:03:01-DQB1*03:02:01 | India Karnataka Kannada Speaking | 0.29 | 174 | 12_57_N_77_36_E |
6 | A*68:01:02-B*15:18:01-C*07:04:01-DRB1*04:03:01-DQB1*03:02:01 | India Kerala Malayalam speaking | 0.28 | 356 | 13_1_N_80_15_E |
7 | A*24:02:13-B*15:18:01-C*16:02:01-DRB1*04:03:01-DQB1*03:02:01 | India Andhra Pradesh Telugu Speaking | 0.27 | 186 | 13_4_N_80_14_E |
8 | A*68:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.23 | 2,492 | 11_32_N_78_52_E |
9 | A*26:01-B*15:18-C*07:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPB1*04:01 | Sri Lanka Colombo | 0.21 | 714 | 6_56_N_79_50_E |
10 | A*03:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | Malaysia Peninsular Indian | 0.18 | 271 | 3_9_N_101_57_E |
11 | A*68:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | Malaysia Peninsular Indian | 0.18 | 271 | 3_9_N_101_57_E |
12 | A*24:02-B*15:18-C*07:04-DRB1*04:02-DQB1*03:02 | USA NMDP Caribean Indian | 0.17 | 14,339 | 38_45_N_76_6_W |
13 | A*68:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.16 | 11,446 | 13_6_N_80_8_E |
14 | A*11:01-B*15:18-C*16:02-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPB1*04:01 | Sri Lanka Colombo | 0.14 | 714 | 6_56_N_79_50_E |
15 | A*03:01:01-B*15:18:01-C*07:04:01-DRB1*04:01:01-DQB1*03:02:01 | India Kerala Malayalam speaking | 0.14 | 356 | 13_1_N_80_15_E |
16 | A*24:02:01-B*15:18:01-C*07:04:01-DRB1*04:01:01-DQB1*03:02:01 | India Kerala Malayalam speaking | 0.14 | 356 | 13_1_N_80_15_E |
17 | A*24:02:01-B*15:18:01-C*16:02:01-DRB1*04:03:01-DQB1*03:02:01 | India Kerala Malayalam speaking | 0.14 | 356 | 13_1_N_80_15_E |
18 | A*11:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.12 | 11,446 | 13_6_N_80_8_E |
19 | A*01:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.10 | 2,492 | 11_32_N_78_52_E |
20 | A*24:02-B*15:18-C*07:04-DRB1*04:02-DQB1*03:02 | USA Hispanic pop 2 | 0.09 | 1,999 | 44_58_N_93_15_W |
21 | A*01:01-B*15:18-C*16:02-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPB1*21:01 | Sri Lanka Colombo | 0.07 | 714 | 6_56_N_79_50_E |
22 | A*30:01-B*15:18-C*06:02-DRB1*04:03-DQA1*02:01-DQB1*03:02-DPB1*26:01 | Sri Lanka Colombo | 0.07 | 714 | 6_56_N_79_50_E |
23 | A*68:01-B*15:18-C*07:04-DRB1*04:01-DQA1*03:01-DQB1*03:02-DPB1*01:01 | Sri Lanka Colombo | 0.07 | 714 | 6_56_N_79_50_E |
24 | A*68:01-B*15:18-C*07:04-DRB1*04:01-DQA1*03:01-DQB1*03:02-DPB1*04:02 | Sri Lanka Colombo | 0.07 | 714 | 6_56_N_79_50_E |
25 | A*68:01-B*15:18-C*07:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPB1*04:01 | Sri Lanka Colombo | 0.07 | 714 | 6_56_N_79_50_E |
26 | A*68:01-B*15:18-C*07:04-DRB1*04:01-DQB1*03:02 | India South UCBB | 0.07 | 11,446 | 13_6_N_80_8_E |
27 | A*24:02-B*15:18-C*16:02-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.06 | 11,446 | 13_6_N_80_8_E |
28 | A*02:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.06 | 2,492 | 11_32_N_78_52_E |
29 | A*26:01-B*15:18-C*16:02-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.06 | 2,492 | 11_32_N_78_52_E |
30 | A*11:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.06 | 2,492 | 11_32_N_78_52_E |
31 | A*02:01:01-B*15:18:01-C*07:04:01-DRB1*04:01:01-DQB1*03:02:01 | China Zhejiang Han | 0.06 | 1,734 | 27_2_N_118_1_E |
32 | A*02:01:01-B*15:18:01-C*08:01:01-DRB1*04:04:01-DQB1*03:02:01 | China Zhejiang Han | 0.06 | 1,734 | 27_2_N_118_1_E |
33 | A*11:01:01-B*15:18:01-C*07:04:01-DRB1*04:01:01-DQB1*03:02:01 | China Zhejiang Han | 0.06 | 1,734 | 27_2_N_118_1_E |
34 | A*11:01:01-B*15:18:01-C*08:01:01-DRB1*04:04:01-DQB1*03:02:01 | China Zhejiang Han | 0.05 | 1,734 | 27_2_N_118_1_E |
35 | A*68:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | Malaysia Peninsular Malay | 0.05 | 951 | 3_9_N_101_57_E |
36 | A*68:01-B*15:18-C*07:12-DRB1*04:03-DQB1*03:02 | Malaysia Peninsular Malay | 0.05 | 951 | 3_9_N_101_57_E |
37 | A*68:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India North UCBB | 0.05 | 5,849 | 28_36_N_77_11_E |
38 | A*24:02-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.05 | 11,446 | 13_6_N_80_8_E |
39 | A*02:01-B*15:18-C*08:01-DRB1*04:03-DQB1*03:02 | USA Asian pop 2 | 0.04 | 1,772 | 44_58_N_93_15_W |
40 | A*24:02-B*15:18-C*07:04-DRB1*04:01-DQB1*03:02 | USA Asian pop 2 | 0.04 | 1,772 | 44_58_N_93_15_W |
41 | A*24:02-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | USA Asian pop 2 | 0.04 | 1,772 | 44_58_N_93_15_W |
42 | A*24:02-B*15:18-C*16:02-DRB1*04:03-DQB1*03:02 | USA Asian pop 2 | 0.04 | 1,772 | 44_58_N_93_15_W |
43 | A*11:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India West UCBB | 0.04 | 5,829 | 19_11_N_73_3_E |
44 | A*01:01-B*15:18-C*16:02-DRB1*04:03-DQB1*03:02 | India East UCBB | 0.04 | 2,403 | 22_25_N_88_18_E |
45 | A*02:11-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India East UCBB | 0.04 | 2,403 | 22_25_N_88_18_E |
46 | A*24:02-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India East UCBB | 0.04 | 2,403 | 22_25_N_88_18_E |
47 | A*68:01-B*15:18-C*07:04-DRB1*04:01-DQB1*03:02 | India East UCBB | 0.04 | 2,403 | 22_25_N_88_18_E |
48 | A*68:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India West UCBB | 0.04 | 5,829 | 19_11_N_73_3_E |
49 | A*02:06-B*15:18-C*08:01-DRB1*04:03-DQB1*03:02 | USA Asian pop 2 | 0.04 | 1,772 | 44_58_N_93_15_W |
50 | A*24:07-B*15:18-C*07:04-DRB1*04:01-DQB1*03:02 | India West UCBB | 0.03 | 5,829 | 19_11_N_73_3_E |
51 | A*31:01-B*15:18-C*07:04-DRB1*04:02-DQB1*03:02 | Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, | 0.03 | 4,335 | 41_22_N_2_11_E |
52 | A*24:02-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.03 | 2,492 | 11_32_N_78_52_E |
53 | A*02:01-B*15:18-C*07:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*03:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
54 | A*11:01-B*15:18-C*08:01-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*02:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
55 | A*26:01-B*15:18-C*07:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*02:02-DPB1*03:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
56 | A*31:01-B*15:18-C*07:04-DRB1*04:03-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
57 | A*01:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India West UCBB | 0.03 | 5,829 | 19_11_N_73_3_E |
58 | A*02:06:01-B*15:18:01-C*08:01:01-DRB1*04:03:01-DQB1*03:02:01 | China Zhejiang Han | 0.03 | 1,734 | 27_2_N_118_1_E |
59 | A*11:01:01-B*15:18:01-C*08:01:01-DRB1*04:06:01-DQB1*03:02:01 | China Zhejiang Han | 0.03 | 1,734 | 27_2_N_118_1_E |
60 | A*31:01:02-B*15:18:01-C*08:01:01-DRB1*04:04:01-DQB1*03:02:01 | China Zhejiang Han | 0.03 | 1,734 | 27_2_N_118_1_E |
61 | A*68:01-B*15:18-C*07:04-DRB1*04:01-DQB1*03:02 | India West UCBB | 0.03 | 5,829 | 19_11_N_73_3_E |
62 | A*03:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India North UCBB | 0.03 | 5,849 | 28_36_N_77_11_E |
63 | A*02:11-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.02 | 11,446 | 13_6_N_80_8_E |
64 | A*26:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.02 | 11,446 | 13_6_N_80_8_E |
65 | A*31:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.02 | 2,492 | 11_32_N_78_52_E |
66 | A*26:01-B*15:18-C*16:02-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.02 | 11,446 | 13_6_N_80_8_E |
67 | A*02:01-B*15:18-C*16:02-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.02 | 2,492 | 11_32_N_78_52_E |
68 | A*01:01-B*15:18-C*16:02-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.02 | 2,492 | 11_32_N_78_52_E |
69 | A*01:01-B*15:18-C*04:01-DRB1*04:01-DQB1*03:02 | India Tamil Nadu | 0.02 | 2,492 | 11_32_N_78_52_E |
70 | A*02:01-B*15:18-C*07:04-DRB1*04:01-DQB1*03:02 | India Tamil Nadu | 0.02 | 2,492 | 11_32_N_78_52_E |
71 | A*24:02-B*15:18-C*16:12-DRB1*04:01-DQB1*03:02 | India Tamil Nadu | 0.02 | 2,492 | 11_32_N_78_52_E |
72 | A*24:07-B*15:18-C*02:02-DRB1*04:04-DQB1*03:02 | India Tamil Nadu | 0.02 | 2,492 | 11_32_N_78_52_E |
73 | A*68:01-B*15:18-C*04:01-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.02 | 2,492 | 11_32_N_78_52_E |
74 | A*68:01-B*15:18-C*07:04-DRB1*04:04-DQB1*03:02 | India South UCBB | 0.02 | 11,446 | 13_6_N_80_8_E |
75 | A*02:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India West UCBB | 0.02 | 5,829 | 19_11_N_73_3_E |
76 | A*24:02-B*15:18-C*16:02-DRB1*04:03-DQB1*03:02 | India West UCBB | 0.02 | 5,829 | 19_11_N_73_3_E |
77 | A*01:01-B*15:18-C*07:04-DRB1*04:01-DQB1*03:02 | India North UCBB | 0.02 | 5,849 | 28_36_N_77_11_E |
78 | A*26:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.02 | 2,492 | 11_32_N_78_52_E |
79 | A*24:07-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India West UCBB | 0.02 | 5,829 | 19_11_N_73_3_E |
80 | A*01:01-B*15:18-C*07:04-DRB1*04:01-DQB1*03:02 | India West UCBB | 0.02 | 5,829 | 19_11_N_73_3_E |
81 | A*33:03-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.02 | 11,446 | 13_6_N_80_8_E |
82 | A*68:01-B*15:18-C*07:04-DRB1*04:04-DQB1*03:02 | India North UCBB | 0.02 | 5,849 | 28_36_N_77_11_E |
83 | A*33:03-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India West UCBB | 0.01 | 5,829 | 19_11_N_73_3_E |
84 | A*11:01-B*15:18-C*16:02-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.01 | 11,446 | 13_6_N_80_8_E |
85 | A*68:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India Central UCBB | 0.01 | 4,204 | 27_1_N_81_19_E |
86 | A*68:01-B*15:18-C*07:04-DRB1*04:01-DQB1*03:02 | India Central UCBB | 0.01 | 4,204 | 27_1_N_81_19_E |
87 | A*11:01-B*15:18-C*07:04-DRB1*04:01-DQB1*03:02 | India South UCBB | 0.01 | 11,446 | 13_6_N_80_8_E |
88 | A*68:01-B*15:18-C*16:02-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.01 | 11,446 | 13_6_N_80_8_E |
89 | A*01:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India Central UCBB | 0.01 | 4,204 | 27_1_N_81_19_E |
90 | A*01:01-B*15:18-C*16:02-DRB1*04:03-DQB1*03:02 | India Central UCBB | 0.01 | 4,204 | 27_1_N_81_19_E |
91 | A*24:02-B*15:18-C*07:04-DRB1*04:04-DQB1*03:02 | India Central UCBB | 0.01 | 4,204 | 27_1_N_81_19_E |
92 | A*33:03-B*15:18-C*07:04-DRB1*04:01-DQB1*03:02 | India Central UCBB | 0.01 | 4,204 | 27_1_N_81_19_E |
93 | A*68:01-B*15:18-C*07:02-DRB1*04:04-DQB1*03:02 | India Central UCBB | 0.01 | 4,204 | 27_1_N_81_19_E |
94 | A*11:01-B*15:18-C*16:02-DRB1*04:03-DQB1*03:02 | USA Asian pop 2 | 0.01 | 1,772 | 44_58_N_93_15_W |
95 | A*68:01-B*15:18-C*16:02-DRB1*04:03-DQB1*03:02 | USA Asian pop 2 | 0.01 | 1,772 | 44_58_N_93_15_W |
96 | A*03:01-B*15:18-C*07:02-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.01 | 2,492 | 11_32_N_78_52_E |
97 | A*03:01-B*15:18-C*15:02-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.01 | 2,492 | 11_32_N_78_52_E |
98 | A*31:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.01 | 11,446 | 13_6_N_80_8_E |
99 | A*02:01-B*15:18-C*16:02-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.01 | 11,446 | 13_6_N_80_8_E |
100 | A*02:11-B*15:18-C*16:02-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.01 | 11,446 | 13_6_N_80_8_E |
101 | A*03:01-B*15:18-C*16:02-DRB1*04:03-DQB1*03:02 | India West UCBB | 0.01 | 5,829 | 19_11_N_73_3_E |
102 | A*24:02-B*15:18-C*07:01-DRB1*04:03-DQB1*03:02 | India West UCBB | 0.01 | 5,829 | 19_11_N_73_3_E |
103 | A*26:01-B*15:18-C*07:04-DRB1*04:07-DQB1*03:02 | India West UCBB | 0.01 | 5,829 | 19_11_N_73_3_E |
104 | A*26:01-B*15:18-C*08:01-DRB1*04:03-DQB1*03:02 | India West UCBB | 0.01 | 5,829 | 19_11_N_73_3_E |
105 | A*02:03-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India North UCBB | 0.01 | 5,849 | 28_36_N_77_11_E |
106 | A*11:01-B*15:18-C*07:04-DRB1*04:02-DQB1*03:02 | India North UCBB | 0.01 | 5,849 | 28_36_N_77_11_E |
107 | A*24:02-B*15:18-C*07:04-DRB1*04:02-DQB1*03:02 | India North UCBB | 0.01 | 5,849 | 28_36_N_77_11_E |
108 | A*26:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India North UCBB | 0.01 | 5,849 | 28_36_N_77_11_E |
109 | A*26:01-B*15:18-C*16:02-DRB1*04:03-DQB1*03:02 | India North UCBB | 0.01 | 5,849 | 28_36_N_77_11_E |
110 | A*68:01-B*15:18-C*16:02-DRB1*04:03-DQB1*03:02 | India North UCBB | 0.01 | 5,849 | 28_36_N_77_11_E |
111 | A*02:131-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.01 | 11,446 | 13_6_N_80_8_E |
112 | A*01:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.01 | 11,446 | 13_6_N_80_8_E |
113 | A*02:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.01 | 11,446 | 13_6_N_80_8_E |
114 | A*03:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.01 | 11,446 | 13_6_N_80_8_E |
115 | A*32:01-B*15:18-C*07:04-DRB1*04:03-DQB1*03:02 | India Tamil Nadu | 0.01 | 2,492 | 11_32_N_78_52_E |
116 | A*11:01-B*15:18-C*07:04-DRB1*04:01-DQB1*03:02 | India West UCBB | 0.01 | 5,829 | 19_11_N_73_3_E |
117 | A*02:11-B*15:18-C*07:04-DRB1*04:04-DQB1*03:02 | India South UCBB | 0.01 | 11,446 | 13_6_N_80_8_E |
118 | A*24:02-B*15:18-C*04:01-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
119 | A*31:01-B*15:18-C*16:02-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
120 | A*02:01-B*15:18-C*07:01-DRB1*04:01-DQB1*03:02 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
121 | A*02:03-B*15:18-C*16:02-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
122 | A*03:01-B*15:18-C*06:02-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
123 | A*03:01-B*15:18-C*08:01-DRB1*04:06-DQB1*03:02 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
124 | A*03:02-B*15:18-C*16:02-DRB1*04:01-DQB1*03:02 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
125 | A*31:01-B*15:18-C*04:01-DRB1*04:02-DQB1*03:02 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
126 | A*33:03-B*15:18-C*07:04-DRB1*04:01-DQB1*03:02 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
127 | A*68:01-B*15:18-C*04:01-DRB1*04:03-DQB1*03:02 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |
128 | A*01:01-B*15:18-C*07:04-DRB1*04:01-DQB1*03:02 | India South UCBB | 0.00 | 11,446 | 13_6_N_80_8_E |